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Functions A–Z

Exported functions and S3 methods. Call the corresponding generic for a fitted object’s methods.

apply.metric.graph.lowpass.path()
Apply a Metric Graph Low-Pass Filter Path
as.data.frame(<synthetic_dataset>)
Summarize a synthetic dataset as one metadata row
bootstrap.malps()
Bootstrap Uncertainty For A Fixed-Selection MALPS Fit
compare.synthetic.dataset()
Compare two synthetic datasets scientifically
fit.chart.kernel()
Fit a Chart-Kernel Smoother
fit.density()
Fit a Density Estimator
fit.graph.trend.filtering()
Fit Graph Trend Filtering
fit.local.likelihood()
Fit a Local-Likelihood Density or Bernoulli Smoother
fit.lpl.tf()
Fit A Local Polynomial Lifting Trend Filter
fit.lps()
Fit a Local Polynomial Smoother
fit.malps()
Fit Model-Averaged Local Polynomial Smoothing
fit.metric.graph.lowpass()
Fit Metric-Conductance Graph Low-Pass Regression
fit.ps.lps()
Fit Prediction-Synchronized Local Polynomial Smoothing
fit.pttf.trend.filtering()
Fit A Parallel-Transport Trend Filter From A PTTF Operator
fit.slpl.tf()
Fit A Fixed-Operator Synchronized LPL-TF Model
fit.ssrhe.hessian.l1.regression()
Fit SSRHE-Style Hessian L1 Regression
fit.ssrhe.hessian.regression()
Fit SSRHE-Style Hessian-Energy Regression
fit.subject.od()
Fit Subject-Occupation Density
geosmooth geosmooth-package
geosmooth package
get.region.boundary()
Get Boundary Vertices of a Region in a Graph
graph.trend.filtering.operator()
Construct a Graph Trend-Filtering Operator
harmonic.smoother()
Perform Harmonic Smoothing with Topology Tracking
lpl.tf.operator()
Construct a Local Polynomial Lifting Trend-Filtering Operator
lps.backend.diagnostics()
Report LPS Backend and Chart-Dimension Diagnostics
lps.grouped.foldid()
Build a Cluster-Respecting Fold Assignment
lps.nested.cv()
Nested Cross-Validation for LPS with Explicit, Recorded Folds
lps.pointwise.band()
Pointwise Variance and Confidence Band for a Fixed-Configuration LPS Fit
malps.gcv()
Compute MALPS Linear-Smoother Diagnostics
materialize.synthetic()
Materialize a synthetic-data specification
materialize.synthetic.instance()
Materialize a frozen synthetic instance
metric.graph.heat.eta.grid()
Construct a Graph Heat-Time Grid
metric.graph.heat.extend.lower()
Propose a Guarded Lower Graph Heat Time
metric.graph.lowpass.basis()
Construct a Reusable Metric Graph Low-Pass Spectral Basis
metric.graph.lowpass.operator()
Construct a Metric-Conductance Graph Low-Pass Operator
print(<summary.geosmooth_fit>) summary(<lps>) summary(<malps>) summary(<ps_lps>) summary(<chart_kernel>) summary(<local_likelihood>) summary(<lpl_tf>) summary(<slpl_tf>) summary(<metric.graph.lowpass.fit>) summary(<metric.graph.lowpass.refit>) summary(<ssrhe.hessian.fit>) summary(<ssrhe.hessian.refit>) summary(<ssrhe.hessian.l1.fit>) summary(<graph.trend.filtering.fit>) summary(<pttf.trend.filtering.fit>) summary(<density_fit>) print(<lpl_tf>) print(<slpl_tf>) print(<density_fit>) print(<ps_lps>) print(<chart_kernel>) print(<local_likelihood>)
Summarize a Geometric Smoother or Probability-Mass Fit
fitted(<lps>) residuals(<lps>) fitted(<malps>) residuals(<malps>) fitted(<ps_lps>) residuals(<ps_lps>) fitted(<chart_kernel>) residuals(<chart_kernel>) fitted(<local_likelihood>) residuals(<local_likelihood>) fitted(<lpl_tf>) residuals(<lpl_tf>) fitted(<slpl_tf>) residuals(<slpl_tf>) fitted(<metric.graph.lowpass.fit>) residuals(<metric.graph.lowpass.fit>) fitted(<metric.graph.lowpass.refit>) residuals(<metric.graph.lowpass.refit>) fitted(<ssrhe.hessian.fit>) residuals(<ssrhe.hessian.fit>) fitted(<ssrhe.hessian.refit>) residuals(<ssrhe.hessian.refit>) fitted(<ssrhe.hessian.l1.fit>) residuals(<ssrhe.hessian.l1.fit>) fitted(<graph.trend.filtering.fit>) residuals(<graph.trend.filtering.fit>) fitted(<pttf.trend.filtering.fit>) residuals(<pttf.trend.filtering.fit>) fitted(<harmonic_smoother>)
Extract Stored Fitted Values and Response Residuals
normalize.density()
Normalize Fitted Values Into a Density
perform.harmonic.smoothing()
Perform Harmonic Smoothing on Graph Function Values
plot(<harmonic_smoother>)
Plot Method for Harmonic Smoother Results
plot(<synthetic_dataset>)
Plot a canonical synthetic dataset
predict(<lpl_tf>)
Predict From A Local Polynomial Lifting Trend Filter
predict(<lps>)
Predict from an LPS Fit
predict(<malps>)
Predict From A MALPS Fit
predict(<slpl_tf>)
Predict From A Fixed-Operator Synchronized LPL-TF Model
print(<graph.trend.filtering.fit>) print(<lpl_tf_operator>) print(<lps>) print(<malps>) print(<malps_bootstrap>) print(<metric.graph.lowpass.fit>) print(<metric.graph.lowpass.refit>) print(<pttf.trend.filtering.fit>) print(<pttf_operator>) print(<slpl_tf_operator>) print(<ssrhe.hessian.operator>) print(<ssrhe.hessian.l1.fit>) print(<ssrhe.hessian.fit>) print(<ssrhe.hessian.refit>) print(<ssrhe.hessian.cv.fit>) print(<ssrhe.hessian.gcv.fit>) print(<transported.graph.hessian.operator>)
Print Geosmooth S3 Objects
print(<harmonic_smoother>)
Print Method for Harmonic Smoother Results
print(<summary.harmonic_smoother>)
Print Method for Summary of Harmonic Smoother Results
print(<synthetic_dataset>)
Print a canonical synthetic dataset
pttf.geometry()
Construct PTTF Local Geometry
pttf.operator()
Construct PTTF Transported-Difference Operators
pttf.operator.filter.rows()
Filter Rows Of A PTTF Operator
refit()
Refit A Model Using Its Stored Geometry
refit(<lpl_tf>)
Refit A Local Polynomial Lifting Trend Filter
refit(<malps>)
Refit A MALPS Smoother With A New Response
refit(<metric.graph.lowpass.fit>)
Refit Metric-Conductance Graph Low-Pass Regression
refit(<slpl_tf>)
Refit A Fixed-Operator Synchronized LPL-TF Model
refit(<ssrhe.hessian.fit>)
Refit SSRHE-Style Hessian-Energy Regression
refit(<ssrhe.hessian.l1.fit>)
Refit SSRHE-Style Hessian L1 Regression
slpl.tf.operator()
Construct A Synchronized LPL-TF Fixed Operator
smoother.matrix()
Extract A Conditional Smoother Matrix
smoother.matrix(<lps>)
Extract the Linear-Smoother Matrix of a Fixed-Configuration LPS Fit
smoother.matrix(<malps>)
Construct The Conditional MALPS Smoother Matrix
ssrhe.hessian.operator()
Construct an SSRHE-Style Local Hessian Energy Operator
ssrhe.support.grid()
Build Candidate Support Profiles for SSRHE Adaptive-Radius Tuning
summary(<harmonic_smoother>)
Summary Method for Harmonic Smoother Results
synthetic.dataset.checksum()
Compute the canonical content checksum of a synthetic dataset
synthetic.registry.ids()
List maintained synthetic recipe IDs
synthetic.registry.seed()
Resolve the legacy seed for an SSRHE registry recipe
synthetic.registry.spec()
Resolve a maintained synthetic recipe
synthetic.response.bernoulli()
Bernoulli response specification
synthetic.response.clustered.gaussian()
Clustered Gaussian response specification
synthetic.response.gaussian()
Gaussian response specification
synthetic.response.heteroskedastic.gaussian()
Heteroskedastic Gaussian response specification
synthetic.response.laplace.outlier()
Laplace response with Gaussian contamination
synthetic.sampling.stratified()
Legacy G4 stratified sampling specification
synthetic.spec()
Assemble a synthetic-data specification
synthetic.truth.gaussian.mixture()
Specify a Gaussian-mixture truth
synthetic.truth.logit()
Specify a sinusoidal finite-design logit truth
synthetic.truth.named()
Specify a versioned named truth evaluator
synthetic.truth.occupation.mixture()
Specify a finite-design occupation-mixture truth
synthetic.truth.polynomial()
Specify a polynomial truth
transported.graph.hessian.operator()
Construct a Transported Graph Hessian Operator
validate.synthetic.dataset()
Validate a canonical synthetic dataset